DatabaseExplorer

A record of type DatabaseExplorer is used to visualize a database in the visualization UI.

DatabaseExplorer record:

  • has type DatabaseExplorer
  • is used for visualization of databases with the same tag
  • can be used when it is open or closed
  • has details describing the visualization model in the following form
    {
        "driving_table": "sample",
        "driving_explore": "sample",
        "driving_column": "sample_id",
        "phenotype_columns": [
            "vitamin_d",
            "coffee_intake",
            "consuming_six_or_more_units_of_alcohol",
            "whole_body_fat_mass",
            "work_hours_per_week"
        ],
        "dashboard": [
            {
                "lkml": {
                    "$dnanexus_link": "file-xxx1"
                },
                "name": "phenotypequery"
            },
            {
                "lkml": {
                    "$dnanexus_link": "file-xxx2"
                },
                "name": "phenotypegenotypequery"
            }
        ],
        "model": {
            "lkml": {
                "$dnanexus_link": "file-yyyy"
            },
            "name": "genomics"
        },
        "view": [
            {
                "lkml": {
                    "$dnanexus_link": "file-zzz1"
                },
                "name": "sample"
            },
            {
                "lkml": {
                    "$dnanexus_link": "file-zzz2"
                },
                "name": "sample_metadata"
            }
            {
                "lkml": {
                    "$dnanexus_link": "file-zzz3"
                },
                "name": "genotype"
            },
            {
                "lkml": {
                    "$dnanexus_link": "file-zzz4"
                },
                "name": "phenotype"
            }
        ]
    }
    
Note: Please contact sales@dnanexus.com if you would like to create a visualization model for your database.

Last edited by Elena Duranova, 2018-10-24 22:03:29

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